Data Management with FHIR 0.1.0 - ci-build

Data Management with FHIR - version de développement local (intégration continue v0.1.0) construite par les outils de publication FHIR (HL7® FHIR® Standard). Voir le répertoire des versions publiées

## : Cette ressource présente les spécifications de l''alignement entre la ressource `Patient` vers les tables correspodantes du CDM OMOP. - TTL Representation

Draft as of 2026-04-16

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    @prefix fhir: <http://hl7.org/fhir/> .
    @prefix owl: <http://www.w3.org/2002/07/owl#> .
    @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
    @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
    @prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

    # - resource -------------------------------------------------------------------

     a fhir:StructureMap ;
      fhir:nodeRole fhir:treeRoot ;
      fhir:id [ fhir:v "CoreFHIRPatient2OMOP"] ; #
      fhir:text [
    fhir:status [ fhir:v "generated" ] ;
    fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Narratif généré : StructureMap CoreFHIRPatient2OMOP</b></p><a name=\"CoreFHIRPatient2OMOP\"> </a><a name=\"hcCoreFHIRPatient2OMOP\"> </a><pre class=\"fml\">#xD;\n<b>map</b><span style=\"color: navy\"> \"</span>https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIRPatient2OMOP<span style=\"color: navy\">\" = \"</span>CoreFHIRPatient2OMOP<span style=\"color: navy\">\"#xD;\n#xD;\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">Cette ressource présente les spécifications de l''alignement entre la ressource `Patient` vers les tables correspodantes du CDM OMOP.</span>#xD;\n#xD;\n<b>uses</b><span style=\"color: navy\"> \"</span><a href=\"http://hl7.org/fhir/R4/patient.html\" title=\"Patient\">http://hl7.org/fhir/StructureDefinition/Patient</a><span style=\"color: navy\">\" </span><b>alias </b>Patient <b>as </b><b>source</b>#xD;\n<b>uses</b><span style=\"color: navy\"> \"</span>https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/LogicalBundle<span style=\"color: navy\">\" </span><b>alias </b>LogicalBundle <b>as </b><b>target</b>#xD;\n<b>uses</b><span style=\"color: navy\"> \"</span>https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPPerson<span style=\"color: navy\">\" </span><b>alias </b>PersonTable <b>as </b><b>target</b>#xD;\n<b>uses</b><span style=\"color: navy\"> \"</span>https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPLocation<span style=\"color: navy\">\" </span><b>alias </b>LocationTable <b>as </b><b>target</b>#xD;\n<b>uses</b><span style=\"color: navy\"> \"</span>https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPDeath<span style=\"color: navy\">\" </span><b>alias </b>DeathTable <b>as </b><b>target</b>#xD;\n#xD;\n<b>imports</b><span style=\"color: navy\"> \"</span><a href=\"StructureMap-CoreFHIR2OMOPPerson.html\" title=\"Mapping FHIR Patient resource to OMOP Person\">https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPPerson</a><span style=\"color: navy\">\"#xD;\n</span><b>imports</b><span style=\"color: navy\"> \"</span><a href=\"StructureMap-CoreFHIR2OMOPLocation.html\" title=\"Mapping Patient resource to Location OMOP Domain\">https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPLocation</a><span style=\"color: navy\">\"#xD;\n</span><b>imports</b><span style=\"color: navy\"> \"</span><a href=\"StructureMap-CoreFHIR2OMOPDeath.html\" title=\"Mapping FHIR Patient resource to OMOP Death\">https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPDeath</a><span style=\"color: navy\">\"#xD;\n</span>#xD;\n<b>group </b>Patient<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>Patient, <b>target</b> <span style=\"color: maroon\">tgtBundle</span><span style=\"color: navy\"> : </span>LogicalBundle<span style=\"color: navy\">)</span><b> &lt;&lt;types&gt;&gt;</b><span style=\"color: navy\"> {#xD;\n</span>  src<span style=\"color: navy\"><b> -&gt; </b></span>tgtBundle.entry<b> as </b><span style=\"color: maroon\">newEntry</span><b> then</b><span style=\"color: navy\"> {#xD;\n</span>    src<span style=\"color: navy\"><b> -&gt; </b></span>newEntry.person = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'PersonTable'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">newPerson</span><b> then</b><span style=\"color: navy\"> {#xD;\n</span>      src<b> then </b>Person<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">newPerson</span><span style=\"color: navy\">)</span> <i>\"transformPerson\"</i><span style=\"color: navy\">;</span>#xD;\n    <span style=\"color: navy\">}</span> <i>\"createPerson\"</i><span style=\"color: navy\">;</span>#xD;\n    src.address<b> as </b><span style=\"color: maroon\">srcAddress</span><b> where </b>(use = 'home') and period.end.empty()<span style=\"color: navy\"><b> -&gt; </b></span>newEntry.location = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'LocationTable'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">newLocation</span><b> then</b><span style=\"color: navy\"> {#xD;\n</span>      srcAddress<b> then </b>Location<span style=\"color: navy\">(</span><span style=\"color: maroon\">srcAddress</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">newLocation</span><span style=\"color: navy\">)</span> <i>\"transformLocation\"</i><span style=\"color: navy\">;</span>#xD;\n    <span style=\"color: navy\">}</span> <i>\"createLocation\"</i><span style=\"color: navy\">;</span>#xD;\n    src<b> where </b>deceased.is(System.DateTime) or deceased.is(System.Boolean)<span style=\"color: navy\"><b> -&gt; </b></span>newEntry.death = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'DeathTable'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">newDeath</span><b> then</b><span style=\"color: navy\"> {#xD;\n</span>      src<b> then </b>Death<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">newDeath</span><span style=\"color: navy\">)</span> <i>\"transformDeath\"</i><span style=\"color: navy\">;</span>#xD;\n    <span style=\"color: navy\">}</span> <i>\"createDeath\"</i><span style=\"color: navy\">;</span>#xD;\n  <span style=\"color: navy\">}</span> <i>\"newEntry\"</i><span style=\"color: navy\">;</span>#xD;\n<span style=\"color: navy\">}#xD;\n#xD;\n</span></pre></div>"^^rdf:XMLLiteral ]
      ] ; #
      fhir:url [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIRPatient2OMOP"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIRPatient2OMOP>
      ] ; #
      fhir:version [ fhir:v "0.1.0"] ; #
      fhir:name [ fhir:v "CoreFHIRPatient2OMOP"] ; #
      fhir:title [ fhir:v "Cette ressource présente les spécifications de l''alignement entre la ressource `Patient` vers les tables correspodantes du CDM OMOP."] ; #
      fhir:status [ fhir:v "draft"] ; #
      fhir:date [ fhir:v "2026-04-16T14:35:38+00:00"^^xsd:dateTime] ; #
      fhir:publisher [ fhir:v "AP-HP"] ; #
      fhir:contact ( [
    fhir:name [ fhir:v "AP-HP" ] ;
        ( fhir:telecom [
    fhir:system [ fhir:v "url" ] ;
    fhir:value [ fhir:v "https://aphp.fr" ]     ] )
      ] ) ; #
      fhir:description [ fhir:v "Cette ressource présente les spécifications de l''alignement entre la ressource `Patient` vers les tables correspodantes du CDM OMOP."] ; #
      fhir:jurisdiction ( [
        ( fhir:coding [
    fhir:system [
    fhir:v "urn:iso:std:iso:3166"^^xsd:anyURI ;
    fhir:l <urn:iso:std:iso:3166>       ] ;
    fhir:code [ fhir:v "FR" ]     ] )
      ] ) ; #
      fhir:structure ( [
    fhir:url [
    fhir:v "http://hl7.org/fhir/StructureDefinition/Patient"^^xsd:anyURI ;
    fhir:l <http://hl7.org/fhir/StructureDefinition/Patient>     ] ;
    fhir:mode [ fhir:v "source" ] ;
    fhir:alias [ fhir:v "Patient" ]
      ] [
    fhir:url [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/LogicalBundle"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/LogicalBundle>     ] ;
    fhir:mode [ fhir:v "target" ] ;
    fhir:alias [ fhir:v "LogicalBundle" ]
      ] [
    fhir:url [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPPerson"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPPerson>     ] ;
    fhir:mode [ fhir:v "target" ] ;
    fhir:alias [ fhir:v "PersonTable" ]
      ] [
    fhir:url [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPLocation"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPLocation>     ] ;
    fhir:mode [ fhir:v "target" ] ;
    fhir:alias [ fhir:v "LocationTable" ]
      ] [
    fhir:url [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPDeath"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPDeath>     ] ;
    fhir:mode [ fhir:v "target" ] ;
    fhir:alias [ fhir:v "DeathTable" ]
      ] ) ; #
      fhir:import ( [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPPerson"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPPerson>
      ] [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPLocation"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPLocation>
      ] [
    fhir:v "https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPDeath"^^xsd:anyURI ;
    fhir:l <https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPDeath>
      ] ) ; #
      fhir:group ( [
    fhir:name [ fhir:v "Patient" ] ;
    fhir:typeMode [ fhir:v "types" ] ;
        ( fhir:input [
    fhir:name [ fhir:v "src" ] ;
    fhir:type [ fhir:v "Patient" ] ;
    fhir:mode [ fhir:v "source" ]     ] [
    fhir:name [ fhir:v "tgtBundle" ] ;
    fhir:type [ fhir:v "LogicalBundle" ] ;
    fhir:mode [ fhir:v "target" ]     ] ) ;
        ( fhir:rule [
    fhir:name [ fhir:v "newEntry" ] ;
          ( fhir:source [
    fhir:context [ fhir:v "src" ]       ] ) ;
          ( fhir:target [
    fhir:context [ fhir:v "tgtBundle" ] ;
    fhir:contextType [ fhir:v "variable" ] ;
    fhir:element [ fhir:v "entry" ] ;
    fhir:variable [ fhir:v "newEntry" ]       ] ) ;
          ( fhir:rule [
    fhir:name [ fhir:v "createPerson" ] ;
            ( fhir:source [
    fhir:context [ fhir:v "src" ]         ] ) ;
            ( fhir:target [
    fhir:context [ fhir:v "newEntry" ] ;
    fhir:contextType [ fhir:v "variable" ] ;
    fhir:element [ fhir:v "person" ] ;
    fhir:variable [ fhir:v "newPerson" ] ;
    fhir:transform [ fhir:v "create" ] ;
              ( fhir:parameter [
    fhir:value [
    a fhir:String ;
    fhir:v "PersonTable"             ]           ] )         ] ) ;
            ( fhir:rule [
    fhir:name [ fhir:v "transformPerson" ] ;
              ( fhir:source [
    fhir:context [ fhir:v "src" ]           ] ) ;
              ( fhir:dependent [
    fhir:name [ fhir:v "Person" ] ;
                ( fhir:variable [ fhir:v "src" ] [ fhir:v "newPerson" ] )           ] )         ] )       ] [
    fhir:name [ fhir:v "createLocation" ] ;
            ( fhir:source [
    fhir:context [ fhir:v "src" ] ;
    fhir:element [ fhir:v "address" ] ;
    fhir:variable [ fhir:v "srcAddress" ] ;
    fhir:condition [ fhir:v "(use = 'home') and period.end.empty()" ]         ] ) ;
            ( fhir:target [
    fhir:context [ fhir:v "newEntry" ] ;
    fhir:contextType [ fhir:v "variable" ] ;
    fhir:element [ fhir:v "location" ] ;
    fhir:variable [ fhir:v "newLocation" ] ;
    fhir:transform [ fhir:v "create" ] ;
              ( fhir:parameter [
    fhir:value [
    a fhir:String ;
    fhir:v "LocationTable"             ]           ] )         ] ) ;
            ( fhir:rule [
    fhir:name [ fhir:v "transformLocation" ] ;
              ( fhir:source [
    fhir:context [ fhir:v "srcAddress" ]           ] ) ;
              ( fhir:dependent [
    fhir:name [ fhir:v "Location" ] ;
                ( fhir:variable [ fhir:v "srcAddress" ] [ fhir:v "newLocation" ] )           ] )         ] )       ] [
    fhir:name [ fhir:v "createDeath" ] ;
            ( fhir:source [
    fhir:context [ fhir:v "src" ] ;
    fhir:condition [ fhir:v "deceased.is(System.DateTime) or deceased.is(System.Boolean)" ]         ] ) ;
            ( fhir:target [
    fhir:context [ fhir:v "newEntry" ] ;
    fhir:contextType [ fhir:v "variable" ] ;
    fhir:element [ fhir:v "death" ] ;
    fhir:variable [ fhir:v "newDeath" ] ;
    fhir:transform [ fhir:v "create" ] ;
              ( fhir:parameter [
    fhir:value [
    a fhir:String ;
    fhir:v "DeathTable"             ]           ] )         ] ) ;
            ( fhir:rule [
    fhir:name [ fhir:v "transformDeath" ] ;
              ( fhir:source [
    fhir:context [ fhir:v "src" ]           ] ) ;
              ( fhir:dependent [
    fhir:name [ fhir:v "Death" ] ;
                ( fhir:variable [ fhir:v "src" ] [ fhir:v "newDeath" ] )           ] )         ] )       ] )     ] )
      ] ) . #