{
  "resourceType" : "StructureMap",
  "id" : "CoreFHIR2OMOPPerson",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Narratif généré : StructureMap CoreFHIR2OMOPPerson</b></p><a name=\"CoreFHIR2OMOPPerson\"> </a><a name=\"hcCoreFHIR2OMOPPerson\"> </a><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> &quot;</span>https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPPerson<span style=\"color: navy\">&quot; = &quot;</span>CoreFHIR2OMOPPerson<span style=\"color: navy\">&quot;\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">Mapping FHIR Patient resource to OMOP Person</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> &quot;</span><a href=\"http://hl7.org/fhir/R4/patient.html\" title=\"Patient\">http://hl7.org/fhir/StructureDefinition/Patient</a><span style=\"color: navy\">&quot; </span><b>alias </b>Patient <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> &quot;</span>https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPPerson<span style=\"color: navy\">&quot; </span><b>alias </b>PersonTable <b>as </b><b>target</b>\r\n\r\n<b>group </b>Person<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>Patient, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\"> : </span>PersonTable<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  src.id<b> as </b><span style=\"color: maroon\">srcId</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.person_source_value = <span style=\"color: maroon\">srcId</span><span style=\"color: navy\">;</span>\r\n  src.gender<b> as </b><span style=\"color: maroon\">srcGender</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    srcGender<span style=\"color: navy\"><b> -&gt; </b></span>tgt.gender_concept_id = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Reference'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">tgtReference</span><b> then</b><span style=\"color: navy\"> {\r\n</span>      srcGender<span style=\"color: navy\"><b> -&gt; </b></span> <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">srcGender</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'https://interop.aphp.fr/ig/fhir/dm/ConceptMap/hl7-gender-to-ohdsi-gender'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'code'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">genderCode</span><span style=\"color: navy\">, </span> tgtReference.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Concept/'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">genderCode</span><span style=\"color: navy\">)</span> <i>&quot;ref&quot;</i><span style=\"color: navy\">;</span>\r\n    <span style=\"color: navy\">}</span> <i>&quot;refConcept&quot;</i><span style=\"color: navy\">;</span>\r\n    srcGender<span style=\"color: navy\"><b> -&gt; </b></span>tgt.gender_source_value = <span style=\"color: maroon\">srcGender</span> <i>&quot;sourceGender&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n  src.birthDate<b> as </b><span style=\"color: maroon\">srcBirthDate</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    srcBirthDate<span style=\"color: navy\"><b> -&gt; </b></span>tgt.birth_datetime = <span style=\"color: maroon\">srcBirthDate</span> <i>&quot;dateTime&quot;</i><span style=\"color: navy\">;</span>\r\n    srcBirthDate<span style=\"color: navy\"><b> -&gt; </b></span>tgt.year_of_birth = <span style=\"color: navy\">(</span>%srcBirthDate.toString().substring(0, 4).toInteger()<span style=\"color: navy\">)</span> <i>&quot;year&quot;</i><span style=\"color: navy\">;</span>\r\n    srcBirthDate<span style=\"color: navy\"><b> -&gt; </b></span>tgt.month_of_birth = <span style=\"color: navy\">(</span>%srcBirthDate.toString().substring(5, 2).toInteger()<span style=\"color: navy\">)</span> <i>&quot;month&quot;</i><span style=\"color: navy\">;</span>\r\n    srcBirthDate<span style=\"color: navy\"><b> -&gt; </b></span>tgt.day_of_birth = <span style=\"color: navy\">(</span>%srcBirthDate.toString().substring(8, 2).toInteger()<span style=\"color: navy\">)</span> <i>&quot;day&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
  },
  "url" : "https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOPPerson",
  "version" : "0.1.0",
  "name" : "CoreFHIR2OMOPPerson",
  "title" : "Mapping FHIR Patient resource to OMOP Person",
  "status" : "draft",
  "date" : "2026-04-16T14:35:38+00:00",
  "publisher" : "AP-HP",
  "contact" : [{
    "name" : "AP-HP",
    "telecom" : [{
      "system" : "url",
      "value" : "https://aphp.fr"
    }]
  }],
  "description" : "Mapping FHIR Patient resource to OMOP Person",
  "jurisdiction" : [{
    "coding" : [{
      "system" : "urn:iso:std:iso:3166",
      "code" : "FR"
    }]
  }],
  "structure" : [{
    "url" : "http://hl7.org/fhir/StructureDefinition/Patient",
    "mode" : "source",
    "alias" : "Patient"
  },
  {
    "url" : "https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/OMOPPerson",
    "mode" : "target",
    "alias" : "PersonTable"
  }],
  "group" : [{
    "name" : "Person",
    "typeMode" : "none",
    "input" : [{
      "name" : "src",
      "type" : "Patient",
      "mode" : "source"
    },
    {
      "name" : "tgt",
      "type" : "PersonTable",
      "mode" : "target"
    }],
    "rule" : [{
      "name" : "id",
      "source" : [{
        "context" : "src",
        "element" : "id",
        "variable" : "srcId"
      }],
      "target" : [{
        "context" : "tgt",
        "contextType" : "variable",
        "element" : "person_source_value",
        "transform" : "copy",
        "parameter" : [{
          "valueId" : "srcId"
        }]
      }]
    },
    {
      "name" : "gender",
      "source" : [{
        "context" : "src",
        "element" : "gender",
        "variable" : "srcGender"
      }],
      "rule" : [{
        "name" : "refConcept",
        "source" : [{
          "context" : "srcGender"
        }],
        "target" : [{
          "context" : "tgt",
          "contextType" : "variable",
          "element" : "gender_concept_id",
          "variable" : "tgtReference",
          "transform" : "create",
          "parameter" : [{
            "valueString" : "Reference"
          }]
        }],
        "rule" : [{
          "name" : "ref",
          "source" : [{
            "context" : "srcGender"
          }],
          "target" : [{
            "contextType" : "variable",
            "variable" : "genderCode",
            "transform" : "translate",
            "parameter" : [{
              "valueId" : "srcGender"
            },
            {
              "valueString" : "https://interop.aphp.fr/ig/fhir/dm/ConceptMap/hl7-gender-to-ohdsi-gender"
            },
            {
              "valueString" : "code"
            }]
          },
          {
            "context" : "tgtReference",
            "contextType" : "variable",
            "element" : "reference",
            "transform" : "append",
            "parameter" : [{
              "valueString" : "Concept/"
            },
            {
              "valueId" : "genderCode"
            }]
          }]
        }]
      },
      {
        "name" : "sourceGender",
        "source" : [{
          "context" : "srcGender"
        }],
        "target" : [{
          "context" : "tgt",
          "contextType" : "variable",
          "element" : "gender_source_value",
          "transform" : "copy",
          "parameter" : [{
            "valueId" : "srcGender"
          }]
        }]
      }]
    },
    {
      "name" : "birthDate",
      "source" : [{
        "context" : "src",
        "element" : "birthDate",
        "variable" : "srcBirthDate"
      }],
      "rule" : [{
        "name" : "dateTime",
        "source" : [{
          "context" : "srcBirthDate"
        }],
        "target" : [{
          "context" : "tgt",
          "contextType" : "variable",
          "element" : "birth_datetime",
          "transform" : "copy",
          "parameter" : [{
            "valueId" : "srcBirthDate"
          }]
        }]
      },
      {
        "name" : "year",
        "source" : [{
          "context" : "srcBirthDate"
        }],
        "target" : [{
          "context" : "tgt",
          "contextType" : "variable",
          "element" : "year_of_birth",
          "transform" : "evaluate",
          "parameter" : [{
            "valueString" : "%srcBirthDate.toString().substring(0, 4).toInteger()"
          }]
        }]
      },
      {
        "name" : "month",
        "source" : [{
          "context" : "srcBirthDate"
        }],
        "target" : [{
          "context" : "tgt",
          "contextType" : "variable",
          "element" : "month_of_birth",
          "transform" : "evaluate",
          "parameter" : [{
            "valueString" : "%srcBirthDate.toString().substring(5, 2).toInteger()"
          }]
        }]
      },
      {
        "name" : "day",
        "source" : [{
          "context" : "srcBirthDate"
        }],
        "target" : [{
          "context" : "tgt",
          "contextType" : "variable",
          "element" : "day_of_birth",
          "transform" : "evaluate",
          "parameter" : [{
            "valueString" : "%srcBirthDate.toString().substring(8, 2).toInteger()"
          }]
        }]
      }]
    }]
  }]
}